Publications

Journals Articles | Patents | Conference Papers

Journal Articles

  1. H. Wimalarathna, S. Ankmnal-Ve(ranna, M. Duong, C. Allan, S. Agrawal, P. Allen, J. Samarabandu, H. Ladak “Using machine learning to assist auditory processing evaluation”. Frontiers in Audiology and Otology, 2023, 1:1215965. doi: 10.3389/fauot.2023.1215965
  2. C. Gamage, R. Dinalankara, J. Samarabandu, A. Subasinghe, “A comprehensive survey on the applications of Machine Learning Techniques on Maritime Surveillance to Detect Abnormal Maritime Vessel Behaviors”, WMU Journal of Maritime Affairs, 2023 (accepted)
  3. S. Gamage, B. Kl ̈opper, J. Samarabandu, “Experiences with Contrastive Predictive Coding in Industrial Time-Series Classification”, Special Interest Group on Knowledge Discovery in Data, Association of Computing Machinery, 2022 (accepted)
  4. H. Wimalarathna, S. Ankmal-Veranna, C. Allan, S. Agrawal, P. Allen, J. Samarabandu, H. Ladak, “Machine Learning Approaches used to Analyze Auditory Evoked Responses from the Human Auditory Brainstem: A Systematic Review”, Computer Methods and Programs in Biomedicine, Volume 226, 2022, doi: 10.1016/j.cmpb.2022.107118.
  5. U. Balagalla, J. Samarabandu, A. Subasinghe, “Automated human chromosome segmentation and feature extraction: Current trends and prospects”, F1000Research 2022, 11(ISCB Comm J):301, doi: 10.12688/f1000research.84360.1
  6. S. Sony, S. Gamage, A. Sadhu, J. Samarabandu, “Vibration-based Multiclass Damage Detection and Localization Using Long Short-Term Memory Networks”, Structures 2022, Volume 35, Pages 436-451, doi: 10.1016/j.istruc.2021.10.088.
  7. S. Sony, S. Gamage, A. Sadhu, J. Samarabandu, “Multiclass Damage Identification in a Full-scale Bridge using Optimally-tuned One-dimensional Convolutional Neural Network”, Journal of Computing in Civil Engineering, ACSE (accepted Oct 19, 2021), doi: 10.1061/(ASCE)CP.1943-5487.0001003
  8. H. Wimalarathna, S. Ankmnal-Veeranna, C. Allan, S. Agrawal, P. Allen, J. Samarabandu, H. Ladak, “Comparison of machine learning models to classify Auditory Brainstem Responses recorded from children with Auditory Processing Disorder”, Computer Methods and Programs in Biomedicine, vol 200, Elsevere, Mar. 2021. doi: 10.1016/j.cmpb.2021.105942
  9. S. Gamage, and J. Samarabandu, “Deep learning methods in network intrusion detection: A survey and an objective comparison” in Journal of Network and Computer Applications (Early access), vol. 169, Elsevere, Nov. 2020. doi: 10.1016/j.jnca.2020.102767
  10. P. Srikantha, J. Liu and J. Samarabandu, "A Novel Distributed and Stealthy Attack on Active Distribution Networks and a Mitigation Strategy," in IEEE Transactions on Industrial Informatics, May 2019. doi: 10.1109/TII.2019.2919202
  11. De Silva T; Cool D; Yuan J; Romagnoli C; Samarabandu J;Fenster A; Ward A, "Robust 2-D–3-D Registration Optimization for Motion Compensation During 3-D TRUS-Guided Biopsy Using Learned Prostate Motion Data," in IEEE Transactions on Medical Imaging, vol. 36, no. 10, pp. 2010-2020, Oct. 2017. doi: 10.1109/TMI.2017.2703150
  12. Subasinghe A, Samarabandu J, *Li Y, Wilkins R, Flegal F, Knoll J, Rogan P. (2016). Centromere detection of human metaphase chromosome images using a candidate based method. F1000Research. 5: 1565.
  13. Rogan PK; Li Y; Wickramasinghe A; Subasinghe A; Caminsky N; Khan W; Samarabandu J; Wilkins R; Flegal F; Knoll JH, Automating dicentric chromosome detection from cytogenetic biodosimetry data, Radiat Prot Dosimetry 2014 Jun;159(1-4):95-104
  14. Arachchige., A.S.; Samarabandu, J.; Knoll, J.; Rogan, P., Intensity Integrated Laplacian Based Thickness Measurement for Detecting Human Metaphase Chromosome Centromere Location, IEEE Transactions on  Biomedical Engineering, , vol. 60, no. 7, pp.2005-2013, 0, doi: 10.1109/TBME.2013.2248008
  15. Tharindu De Silva, Aaron Fenster, Jeffrey Bax, Cesare Romagnoli, Jonathan Izawa, Jagath Samarabandu, and Aaron D. Ward, Quantification of prostate deformation due to needle insertion during TRUS-guided biopsy: Comparison of hand-held and mechanically stabilized systems, Med. Phys. 38, 1718 (2011), DOI:10.1118/1.3557883
  16. T De Silva, A Fenster, J Samarabandu, and A Ward, Evaluating Image-Similarity Metrics to Detect Prostate Motion during 3D TRUS-Guided Prostate Biopsy, Med. Phys. 38, 3838 (2011), DOI:10.1118/1.3613452
  17. De Silva, T., Fenster, A., Baxter, J., Romagnoli, C.,  Izawa, J., Samarabandu, J., Ward, A. D., Quantification of prostate deformation due to needle insertion during TRUS-guided biopsy: Comparison of hand-held and mechanically stabilized systems, Medical Physics, Med. Phys. 38, 1718 (2011), DOI:10.1118/1.3557883
  18. Ukwatta, E., Awad, J., Ward, A. D., Buchananb, D., Samarabandu, J., Parraga, G., Fenster, A., Three-dimensional Ultrasound of Carotid Atherosclerosis: Semi-automated Segmentation Using a Level Set-based Method, Medical Physics, 38, 2479 (2011), DOI:10.1118/1.3574887
  19. E Ukwatta, J Awad, A Ward, D Buchanan, J Samarabandu, G Parraga, and A Fenster Semi-Automated Segmentation Method to Quantify Carotid Atherosclerosis from 3D Ultrasound Images, Med. Phys. 38, 3718 2011 DOI:10.1118/1.3612989
  20. Ukwatta, E., Samarabandu, J., Hall, M., Machine Vision System for Automated Spectroscopy, Springer-Verlag - Machine Vision and Applications, DOI: 10.1007/s00138-011-0338-8, 2011
  21. Premaratne, U., Samarabandu, J., Sidhu, T., Beresh, B., Tan, J-C, An Intrusion Detection System for IEC61850 Automated Substations, IEEE Transactions on Power Delivery, 25(4): 2376 - 2383, 2010
  22. Premaratne, U., Samarabandu, J., Sidhu, T., Beresh, B., Tan, J-C, Security Analysis and Auditing of IEC61850 Automated Substations, IEEE Transactions on Power Delivery, 39(3): 658 - 671, 2010
  23. Liu, X., Samarabandu, J., Veksler, O., Order Preserving Moves for Graph Cut based Optimization, IEEE Transactions on Pattern Analysis and Machine Intelligence, 32(7):1182 - 1196, 2010
  24. Rodrigo, R., Samarabandu, J., Robust and Efficient Feature Tracking for Indoor Navigation, IEEE Transactions on Systems Man and Cybernetics, Part B, 39(3): 658-671, 2009
  25. Nanayakkara, N., Chiu, B., Samani, A., Spence, D., Samarabandu, J., Paraga, G., Fenster, A., Nonrigid Registration of Three-dimensional Ultrasound and Magnetic Resonance Images of the Carotid Arteries, Medical Physics, 36:373-385, 2009
  26. Nanayakkara, N., Chiu, B., Samani, A., Spence, D. and Samarabandu, J., Fenster A., A “Twisting and Bending” Model-based Nonrigid Image Registration Technique for 3D Ultrasound Carotid Images, IEEE Transactions on Medical Imaging, 27(10): 1378-1388, 2008
  27. Fuzzy Inference System for Software Product Family Process Evaluation, Faheem Ahmed, Luiz Fernando Capretz, Jagath Samarabandu, Journal of Information Sciences, 178: 2780–2793, 2008
  28. A fast and robust full automatic clinical system for cardiac functional analysis on 4D and 5D MRI, Shuo Li, Xiaoqing Liu, Jagath Samarabandu, Ian Ross, Greg Garvin, and R. Rankin,  Angiographic Imaging: International Journal of Computer Assisted Radiology and Surgery, vol.2(Suppl 1):S68-S81, 2007.
  29. Recent Advances in Simultaneous Localization and Map-building Using Computer Vision, Z. Chen, J. Samarabandu and R. Rodrigo,  Advanced Robotics, 21(3):233-256, 2007
  30. Muslimi, B, Caprets, M.and Samarabandu, J, An Efficient Technique for Extracting Fuzzy Rules From Neural Networks, International Journal of Intelligent Technology, 1(4):299-305, 2006.
  31. Samarabandu, J. and Liu, X., An Edge-based Text Region Extraction Algorithm for Indoor Mobile Robot Navigation, International Journal of Signal Processing, 3(4):273-280, 2006.
  32. Structural labelling of indoor images using a support vector machine based learning algorithm, X. Liu and J. Samarabandu, WSEAS Transactions on Signal Processing, 3(8):1489-1494, 2006.
  33. Frame frame interpolation in video sequences using energy minimization, R. Rodrigo and J. Samarabandu, WSEAS Transactions on Signal Processing, 3(8):1476-1481, 2006
  34. Rank-scaled Mutation rate for Genetic Algorithms, M. Sewel, J. Samarabandu, R. Rodrigo and K. McIsaac,, International Journal of Information Technology, 3(1):32-26, 2006
  35. Prostate Segmentation by Feature Enhancement using Domain Knowledge and Adaptive Region based Operations, N. Nanayakkara, J. Samarabandu, A. Fenster, Journal of Physics in Medicine and Biology, 51(2006):1831-1846, 2006
  36. Three-Dimensional Visualization Of Transcription Sites And Their Association With Splicing Factor-Rich Nuclear Specles, X. Y. Wei, S. Somanathan, J. Samarabandu, R. Berezney, Journal of Cell Biology, 146(3):543-558, 1999
  37. Segregation of transcription and replication sites into higher order domains. X.Wei, J. Samarabandu, R. Devdhar, A. Siegel, R. Acharya, R. Berezney, Science, 281:1502-1505, 1998
  38. Spatial and Temporal dynamics of DNA replication sites in mammalian cells, H. Ma, J. Samarabandu, R. Devdhar, R. Acharya, P. C. Cheng,  C. Meng, R. Berezney, Journal of Cell Biology, 143(6):1415-1425, 1998.
  39. An Algorithm for Automated Alignment of Radio-graphs for Image Subtraction, Samarabandu, J., E. Hausmann, K. Allen and R. Acharya, Oral Surgery, Oral Medicine and Oral Biology, 77(1):75, 1994
  40. Analysis of Bone Xrays using Morphological Fractals, Samarabandu, J., R. Acharya, E. Hausmann and K. Allen, IEEE Transactions on Medical Imaging, 12(3):466, 1993
  41. Visualization and Interactive Exploration of Multi-Dimensional Confocal Images, Samarabandu J., R. Acharya, P. C. Cheng, Computerized Medical Imaging and Graphics, 17(3):183, 1993
  42. Geodesic Skeleton for Representing Biological Structures in Microscopy Images, R. Acharya, C. Edirisinghe and J. Samarabandu, Trans. Royal Microscopical Society, July 1992
  43. Digital warping of dental radiographs to correct projective distortion J. Samarabandu, R. Acharya, E. Hausmann and K. Allen, AADR, Boston, 1992

Patents

  1. US 8605981 - Centromere detector and method for determining radiation exposure from chromosome abnormalities; Peter Rogan, Joan Knoll, Jagath Samarabandu, Akila Subasinghe; granted on Dec 10, 2013
  2. US 8419218 - Solid state light assembly having light sources in a ring; Mahendra Dassanayake, Srini De Mel, Jagath Samarabandu; granted on Apr 16, 2013
  3. US 8449137 - Solid state tube light assembly; Mahendra Dassanayake, Srini De Mel, Jagath Samarabandu; granted on May 28, 2013
  4. US 8186852 - Opto-thermal solution for multi-utility solid state lighting device using conic section geometries; Mahendra Dassanayake, Srini De Mel, Jagath Samarabandu; grated on May 29, 2012
  5. US 8277082 - Solid state light assembly having light redirection elements; Mahendra Dassanayake, Srini De Mel, Jagath Samarabandu; grated on Oct 2, 2012
  6. US 8192057 - Solid state spot light assembly; Mahendra Dassanayake, Srini De Mel, Jagath Samarabandu; granted on Jun 5, 2012

Selected Conference Papers (Total 102)

  1. H. Wimalarathna, S. Ankmal-Veranna, C. Allan, M. Doung, S. Agrawal, P. Allen, J. Samarabandu, H. Ladak, “Identifying Clinical Subgroups in Children Suspected of Auditory Processing Disorder using Machine Learning Methods”, IEEE-EMBS International Conference on Biomedical and Health Informatics, Ioannina, Greece, Sept. 2022
  2. S. Gamage, B. Kl ̈opper, J. Samarabandu, “Experiences with Contrastive Predictive Coding in Industrial Time-Series Classification”, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, Sept. 2022
  3. S. Vecile, K. Lacroix, K. Grolinger, J. Samarabandu, “Malicious and Benign URL Dataset Generation Using Character-Level LSTM Models”, 5th IEEE Conference on Dependable and Secure Computing, June 2022 (in press)
  4. G. Loganathan, J. Samarabandu and X. Wang, "Real-Time Intrusion Detection in Network Traffic Using Adaptive and Auto-Scaling Stream Processor," 2018 IEEE Global Communications Conference (GLOBECOM), Abu Dhabi, United Arab Emirates, 2018, pp. 1-6. doi: 10.1109/GLOCOM.2018.8647489
  5. N. Rajasinghe, J. Samarabandu and X. Wang, "INSECS-DCS: A Highly Customizable Network Intrusion Dataset Creation Framework," 2018 IEEE Canadian Conference on Electrical & Computer Engineering (CCECE), Quebec City, QC, 2018, pp. 1-4. doi: 10.1109/CCECE.2018.8447661
  6. W. Anani and J. Samarabandu, "Comparison of Recurrent Neural Network Algorithms for Intrusion Detection Based on Predicting Packet Sequences," 2018 IEEE Canadian Conference on Electrical & Computer Engineering (CCECE), Quebec City, QC, 2018, pp. 1-4. doi: 10.1109/CCECE.2018.8447793
  7. G. Loganathan, J. Samarabandu and X. Wang, "Sequence to Sequence Pattern Learning Algorithm for Real-Time Anomaly Detection in Network Traffic," 2018 IEEE Canadian Conference on Electrical & Computer Engineering (CCECE), Quebec City, QC, 2018, pp. 1-4. doi: 10.1109/CCECE.2018.8447597
  8. M. B. Shahbaz, Xianbin Wang, A. Behnad and J. Samarabandu, "On efficiency enhancement of the correlation-based feature selection for intrusion detection systems," 2016 IEEE 7th Annual Information Technology, Electronics and Mobile Communication Conference (IEMCON), Vancouver, BC, 2016, pp. 1-7; doi: 10.1109/IEMCON.2016.7746286
  9. H. D. R. Lakmal and J. Samarabandu, "Novel velocity model to improve indoor localization using inertial navigation with sensors on a smartphone," 2016 IEEE Canadian Conference on Electrical and Computer Engineering (CCECE), Vancouver, BC, 2016, pp. 1-4; doi: 10.1109/CCECE.2016.7726814
  10. U. S. K. P. M. Thanthrige, J. Samarabandu and X. Wang, "Machine learning techniques for intrusion detection on public dataset," 2016 IEEE Canadian Conference on Electrical and Computer Engineering (CCECE), Vancouver, BC, 2016, pp. 1-4; doi: 10.1109/CCECE.2016.7726677
  11. J. Samarabandu and K. Ranaweera, "Analyzing surveillance videos using automatically generated processing sequences with knowledge-augmented genetic algorithms," 2016 IEEE Canadian Conference on Electrical and Computer Engineering (CCECE), Vancouver, BC, 2016, pp. 1-5; doi: 10.1109/CCECE.2016.7726711
  12. Kalil, M.; Samarabandu, J.; Shami, A.; Al-Dweik, A., "Performance evaluation of genetic algorithms for resource scheduling in TLE uplink," Wireless Communications and Mobile Computing Conference (IWCMC), 2014 International , vol., no., pp.948,952, 4-8 Aug. 2014; doi: 10.1109/CCECE.2012.6335045
  13. Kayal, O.; Samarabandu, J., "Use of Kinect in a Multicamera setup for action recognition applications," Electrical and Computer Engineering (CCECE), 2014 IEEE 27th Canadian Conference on , vol., no., pp.1,6, 4-7 May 2014; doi: 10.1109/CCECE.2014.6901117
  14. Samani, A.; Ghenniwa, H.H.; Samarabandu, J., "Risk-based modelling for managing privacy protection," Electrical & Computer Engineering (CCECE), 2012 25th IEEE Canadian Conference on , vol., no., pp.1,5, April 29 2012-May 2 2012; doi: 10.1109/CCECE.2012.6335045
  15. Weerathunga, P.E.; Samarabandu, J.; Sidhu, T., Implementation of IPSec in substation gateways, 6th IEEE International Conference on Information and Automation for Sustainability (ICIAfS), 2012, pp.327,331, 27-29 Sept. 2012
  16. Yanxin Li; Wickramasinghe, A.; Akila Subasinghe, A.; Samarabandu, J.; Knoll, J.; Wilkins, R.; Flegal, F.; Rogan, P., Towards large scale automated interpretation of cytogenetic biodosimetry data, 6th IEEE International Conference on Information and Automation for Sustainability (ICIAfS), 2012 , pp.30,35, 27-29 Sept. 2012, doi: 10.1109/ICIAFS.2012.6420039
  17. Samani, Afshan; Ghenniwa, Hamada H.; Samarabandu, Jagath; , Risk-based modelling for managing privacy protection, 25th IEEE Canadian Conference on Electrical & Computer Engineering (CCECE), pp.1-5, April 29 2012-May 2 2012, doi: 10.1109/CCECE.2012.6335045
  18. Subasinghe Arachchige, Akila; Samarabandu, Jagath; Rogan, Peter K.; Knoll, Joan H.M.; , Intensity integrated Laplacian algorithm for human metaphase chromosome centromere detection, 25th IEEE Canadian Conference on Electrical & Computer Engineering (CCECE), pp.1-4, April 29 2012-May 2 2012, doi: 10.1109/CCECE.2012.6334866